Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGTGCACCGCGGACCTGCAGG
((((((((((((.((((((((&))))..))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016390
GeneSymbolSPOUT1
Binding site2454,2479
Score0.923
Seed1
Au0.309
Energy-23.9
Binding len25
Me-5.227
Phylopstem-0.31022907857142856
Phylopflank0.0006214212499999899
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure