Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACTGCACTGCAGCTGGGGT
((.(((((((((.((((.(((&)))..))))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016395
GeneSymbolHACD3
Binding site2259,2281
Score0.885
Seed0
Au0.441
Energy-22.9
Binding len22
Me-6.784
Phylopstem-0.3877516333333334
Phylopflank-0.064995193
Longest consecutive pairings13
Position of longest consecutive pairings4
Pairings in 3prime end7
Position3UTR
2D Structure