Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTCAAGACCAGGTTCACACAGCCGCTGCTGCC
..(((((.((((((((.....&.)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330429
GeneSymbolFSD1
Binding site1393,1428
Score1.0
Seed0
Au0.426
Energy-24.1
Binding len16
Me-7.271
Phylopstem-0.374556725
Phylopflank-0.039585920000000024
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure