Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATGCACCACCTGCTGCTGGAGG
((.((((.(((((((((.(((&))).))))..))).)).)))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016404
GeneSymbolTRMT112
Binding site279,304
Score0.846
Seed0
Au0.412
Energy-18.5
Binding len25
Me-7.809
Phylopstem0.09397608333333336
Phylopflank1.285749637499999
Longest consecutive pairings4
Position of longest consecutive pairings17
Pairings in 3prime end7
PositionCDS
2D Structure