Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGACCTGTGTGGCAGGA
.((((.((((((...(((....&)))...)))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016408
GeneSymbolCDK5RAP1
Binding site1673,1691
Score0.923
Seed0
Au0.485
Energy-17.2
Binding len18
Me-8.576
Phylopstem1.4986532833333335
Phylopflank3.06514682375
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure