Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACCCATTTTGGTTTTCACTATTGAGACCGCAACTGCT
..((((.((((((((((((((&)))))))......................))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016417
GeneSymbolGLRX5
Binding site578,620
Score0.923
Seed0
Au0.574
Energy-23.7
Binding len42
Me-6.501
Phylopstem0.4056739722222227
Phylopflank-0.19554698750000005
Longest consecutive pairings7
Position of longest consecutive pairings35
Pairings in 3prime end8
Position3UTR
2D Structure