Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATGTTTATATTCCTTAGAGAACTATTTTATATTGTGCGCTGGGG
.((((((.(((((((((((...&.))))))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016422
GeneSymbolRNF141
Binding site3843,3889
Score1.0
Seed1
Au0.647
Energy-20.8
Binding len20
Me-6.107
Phylopstem4.3863556363636365
Phylopflank4.692934001250001
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure