Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGGCAGCGCAGCCGCTGCCGCAGG
((((.((.((((((((...((&.))...)))))))).)).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016422
GeneSymbolRNF141
Binding site15,43
Score0.846
Seed0
Au0.338
Energy-22.1
Binding len23
Me-10.37
Phylopstem1.0289985000000001
Phylopflank0.6300077632954546
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end5
Position5UTR
2D Structure