Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGAAGAAGCAGCTGCGGCTGCT
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330620
GeneSymbolMSANTD1
Binding site1444,1472
Score0.923
Seed1
Au0.309
Energy-26.7
Binding len16
Me-4.957
Phylopstem2.9195038571428578
Phylopflank3.3763134062499995
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure