Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGAGCCGGGGCTGTC
..((((((.(((((.(.....&).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016438
GeneSymbolHIGD1B
Binding site580,595
Score0.923
Seed1
Au0.456
Energy-19.2
Binding len15
Me-6.749
Phylopstem0.30703549999999996
Phylopflank0.4678412425000001
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure