Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCCGCAGCTGA
...((((((((((((.((((.&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016446
GeneSymbolTMEM8B
Binding site667,684
Score0.846
Seed0
Au0.412
Energy-28.8
Binding len17
Me-6.748
Phylopstem4.623463083333333
Phylopflank4.22994637
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure