Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGTATTGTTGCTAGC
..((((((.((((((((((...&)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016447
GeneSymbolPALS2
Binding site3613,3630
Score0.846
Seed1
Au0.735
Energy-16.0
Binding len17
Me-6.013
Phylopstem0.9509337999999999
Phylopflank0.55631967875
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure