Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGCGGCTGCAC
.(((((((((((.........&))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016451
GeneSymbolCOPB1
Binding site34,46
Score0.923
Seed1
Au0.353
Energy-22.4
Binding len12
Me-6.908
Phylopstem2.1355656363636366
Phylopflank1.6606536579166664
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end0
Position5UTR
2D Structure