Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACAGTGAGAGGCCGCAGATCCCCTTTGTGTGGAAACGACCAGGG
.((((((((((((((((((...&)))))).....................))))))).......))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016452
GeneSymbolCAPN9
Binding site275,322
Score0.846
Seed1
Au0.5
Energy-16.9
Binding len47
Me-3.793
Phylopstem3.3799552113043476
Phylopflank3.3375530775
Longest consecutive pairings7
Position of longest consecutive pairings13
Pairings in 3prime end5
PositionCDS
2D Structure