Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGAGCAGCCACCTCCTGCAGCTGA
...(((((((((((((..(((&)))..)))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016452
GeneSymbolCAPN9
Binding site1908,1934
Score0.923
Seed0
Au0.412
Energy-21.8
Binding len26
Me-6.515
Phylopstem1.94081464
Phylopflank2.4571899567499997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure