Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TATGCCGGGTG
((((((((((............&)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016453
GeneSymbolNCKIPSD
Binding site1096,1107
Score0.846
Seed1
Au0.426
Energy-16.3
Binding len11
Me-13.224
Phylopstem3.2584215
Phylopflank3.6850611832499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure