Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGGTGGCCTATTACCAAATGGAACACCGAGCATCACTGCGGCTGCT
..((((((((((((((..(((&.)))..)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016453
GeneSymbolNCKIPSD
Binding site1434,1484
Score0.962
Seed1
Au0.456
Energy-26.1
Binding len23
Me-4.957
Phylopstem4.161416375
Phylopflank4.8537145125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure