Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGACTGAGAAGCATCGAGGCTATAGGACGCAGCTGTT
..((((((((.(((.((.(((&.))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016454
GeneSymbolEMC4
Binding site54,96
Score0.923
Seed1
Au0.368
Energy-20.3
Binding len20
Me-8.517
Phylopstem-0.73015585
Phylopflank-0.09565329187500016
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure