Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGGCTACAACCGCTCGCTGGAC
.(.((((.(((((((((....&.)))))))))..)))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016457
GeneSymbolPRKD2
Binding site2917,2943
Score1.0
Seed0
Au0.412
Energy-21.9
Binding len19
Me-7.664
Phylopstem-0.29264219999999996
Phylopflank0.05973384124999995
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure