Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TGGAGCAGCAGCTGCAGC
((((((((((.(((.((....&)).))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016458
GeneSymbolHGH1
Binding site1137,1155
Score1.0
Seed1
Au0.382
Energy-21.8
Binding len18
Me-7.498
Phylopstem1.3580953
Phylopflank1.483102145
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure