Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGGAGAGGGTATTCCTCAAGCCCAGCATCCATCTGGTGA
(((((((((((((((((((((.&)))))))))))))..........))))............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001354382
GeneSymbolPPIP5K1
Binding site4482,4526
Score0.923
Seed1
Au0.441
Energy-24.8
Binding len44
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure