Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCAACAGTGACCTGCGGGACCTGCT
..(((((((((((((((((((&)))))))))).......)))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016466
GeneSymbolANKRD39
Binding site541,571
Score0.846
Seed1
Au0.382
Energy-21.7
Binding len30
Me-4.957
Phylopstem4.170280068965517
Phylopflank2.6023743812499998
Longest consecutive pairings10
Position of longest consecutive pairings20
Pairings in 3prime end8
PositionCDS
2D Structure