Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCTACACTGCGCTGCAC
.((((((.((((.((((.(((&)))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016466
GeneSymbolANKRD39
Binding site215,236
Score0.897
Seed1
Au0.353
Energy-21.0
Binding len21
Me-7.396
Phylopstem0.4508491666666667
Phylopflank-0.03493509812499999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure