Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGATGGAAGAGTTCACTCATGTTTGCACCCGCGGTGATGCGT
.(((((((((((.((((((..&.)))))).)))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016468
GeneSymbolCOX16
Binding site76,120
Score0.923
Seed1
Au0.485
Energy-20.4
Binding len22
Me-5.082
Phylopstem0.029732430769230753
Phylopflank0.010456817500000026
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure