Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTGTCATGCTGTAGTTGCC
..(((((((((((((..((((&))))..)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016470
GeneSymbolOSER1
Binding site1380,1401
Score0.923
Seed1
Au0.618
Energy-17.7
Binding len21
Me-5.19
Phylopstem2.2629585
Phylopflank3.2048270499999996
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure