Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTACAACTGATGGCTT
....(((((((((((((((((&)))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016475
GeneSymbolJKAMP
Binding site1805,1824
Score0.923
Seed0
Au0.691
Energy-19.6
Binding len19
Me-9.547
Phylopstem0.0304013177777778
Phylopflank0.043085525875
Longest consecutive pairings12
Position of longest consecutive pairings7
Pairings in 3prime end8
Position3UTR
2D Structure