Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTATGCCAGA
..(((((((((...........&))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016485
GeneSymbolVTA1
Binding site453,463
Score0.923
Seed1
Au0.618
Energy-16.7
Binding len10
Me-11.418
Phylopstem4.25908151111111
Phylopflank4.988373310000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure