Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGATATCTCACCAAATCACTGCTGAACTGGAGCTGCAAG
((((((((.(((((....(((&.)))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016485
GeneSymbolVTA1
Binding site4650,4694
Score1.0
Seed1
Au0.529
Energy-22.7
Binding len23
Me-5.962
Phylopstem0.61732425
Phylopflank0.3013499525
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure