Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGCACAGGTGTAGC
(((((.(((..(((((.((((&)))).))))).))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016485
GeneSymbolVTA1
Binding site708,729
Score0.923
Seed0
Au0.544
Energy-19.5
Binding len21
Me-9.906
Phylopstem2.051685
Phylopflank3.1667901274999997
Longest consecutive pairings5
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure