Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACAAAACTGTTGCTGCAC
.((((((.((((((((.((((&)))).)))..))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016488
GeneSymbolPPHLN1
Binding site1467,1490
Score0.846
Seed1
Au0.574
Energy-22.3
Binding len23
Me-6.107
Phylopstem0.20300480000000004
Phylopflank0.020751900000000024
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure