Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAACATGTCATAATATCATTGACAACTGTAAGCTGG
...(((((((((((((.....&.))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016489
GeneSymbolNT5C3A
Binding site244,283
Score0.846
Seed0
Au0.662
Energy-18.2
Binding len16
Me-6.515
Phylopstem0.44836034285714294
Phylopflank0.30442969125
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure