Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCATCACCTTTTCCATTCCAGCTGCAT
.((((((((.(((.(((((((&))))))).))).............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016494
GeneSymbolRNF181
Binding site294,327
Score0.923
Seed1
Au0.515
Energy-21.1
Binding len33
Me-5.893
Phylopstem3.6576449999999996
Phylopflank4.47061298
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure