Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCCTCCACCAGCTGCC
..(((((((.((..((.((((&))))))..))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016494
GeneSymbolRNF181
Binding site164,184
Score0.846
Seed1
Au0.412
Energy-19.5
Binding len20
Me-8.345
Phylopstem3.8569880285714286
Phylopflank2.4048480562500005
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure