Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCAGCCGCGGGGCGCAGA
((((..((((((((((..(((&)))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016498
GeneSymbolMTFP1
Binding site120,141
Score0.846
Seed0
Au0.294
Energy-22.7
Binding len21
Me-9.958
Phylopstem0.17126076000000004
Phylopflank1.6457035475000001
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure