Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTAACAGTCAGGAGCTGCT
..((((((.(((((((.(((.&))).)))))).).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016500
GeneSymbolPBDC1
Binding site915,935
Score0.846
Seed1
Au0.544
Energy-17.1
Binding len20
Me-6.013
Phylopstem0.46539824999999996
Phylopflank0.30772454125
Longest consecutive pairings6
Position of longest consecutive pairings10
Pairings in 3prime end6
Position3UTR
2D Structure