Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCCAGCTGCAGA
(((((((((.((((...((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016506
GeneSymbolKBTBD4
Binding site689,707
Score1.0
Seed1
Au0.426
Energy-22.8
Binding len18
Me-6.149
Phylopstem0.5284441622222222
Phylopflank1.3529950865
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure