Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGACAGCCGCCTTGCTGCAAC
(((((((.((((((((..(((&)))...))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016507
GeneSymbolCDK12
Binding site4471,4496
Score1.0
Seed1
Au0.426
Energy-27.7
Binding len25
Me-6.251
Phylopstem4.294188
Phylopflank3.0328007899999996
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure