Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTGCAGCCGTCATCGGGAGGCGGCAGC
((((.((((((((((((((((&)))))))))))))........))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016507
GeneSymbolCDK12
Binding site643,673
Score0.897
Seed0
Au0.397
Energy-23.5
Binding len30
Me-8.057
Phylopstem2.514370166666668
Phylopflank3.2760853062499997
Longest consecutive pairings13
Position of longest consecutive pairings17
Pairings in 3prime end8
PositionCDS
2D Structure