Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCCAGCGGCTGCGGG
(((((((((((((((......&)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016510
GeneSymbolSCLY
Binding site105,123
Score1.0
Seed1
Au0.324
Energy-22.3
Binding len18
Me-4.171
Phylopstem-0.6643230117647059
Phylopflank1.0397806825
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure