Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTCAACACGAGTTGCAGG
((((((((.((((((..((((&))))..)))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016516
GeneSymbolVPS54
Binding site1216,1238
Score0.923
Seed1
Au0.544
Energy-21.7
Binding len22
Me-5.227
Phylopstem0.59564595
Phylopflank1.7492821574999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure