Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGCTCAGGGCGGCTGCC
..((((((((....((.((((&)))).)).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016516
GeneSymbolVPS54
Binding site457,478
Score0.846
Seed1
Au0.324
Energy-21.2
Binding len21
Me-13.275
Phylopstem0.19654912500000002
Phylopflank0.9799787606250002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure