Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCTCACACCTGTAATCTCGGCACTTTGGGGGGCTGAGACAGGCGG
...((((((((((((((((((&)))))..........................))))))))...)))).).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_016518
GeneSymbolPIPOX
Binding site1664,1713
Score0.846
Seed0
Au0.426
Energy-21.3
Binding len49
Me-6.515
Phylopstem-0.18948294583333325
Phylopflank0.12458160874999999
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure