Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCGTCACCCCAGCAGCTGCT
..((((((((((((((..((.&))..)))..)))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016519
GeneSymbolAMBN
Binding site1228,1252
Score1.0
Seed1
Au0.426
Energy-20.4
Binding len24
Me-4.957
Phylopstem0.6474042526315791
Phylopflank0.8347860372500001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure