Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTCATCAACTGCAGCA
.....((((((((((...(((&))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016521
GeneSymbolTFDP3
Binding site887,906
Score0.923
Seed0
Au0.559
Energy-20.2
Binding len19
Me-13.899
Phylopstem3.0592199
Phylopflank2.4819777307500006
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure