Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTCAACATGGCGGCTGCGGC
((((((((((.((((.(((..&)))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016525
GeneSymbolUBAP1
Binding site11,32
Score0.846
Seed1
Au0.328
Energy-21.5
Binding len21
Me-6.995
Phylopstem2.5546695
Phylopflank2.063243048863636
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure