Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAACATGCCCAGCTGTC
..(((((((.((((((..(((&)))..))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016525
GeneSymbolUBAP1
Binding site1320,1340
Score0.846
Seed1
Au0.471
Energy-20.0
Binding len20
Me-6.2
Phylopstem2.0485592857142856
Phylopflank2.39882105675
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure