Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTCAGGCCCATGCGCGAGAGCAGCTGTC
..((((((((..((((..(((&.))).....))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016527
GeneSymbolHAO2
Binding site148,179
Score0.846
Seed1
Au0.515
Energy-19.3
Binding len24
Me-11.129
Phylopstem2.8011583124999997
Phylopflank3.5210828625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure