Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTGCATTGACTAAGAAAACTCATCCTCACTTATGAGGTGACCAGGA
.((((((((.(((((((((((.&)))))))))))............................))).))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016529
GeneSymbolATP8A2
Binding site5754,5803
Score0.846
Seed1
Au0.471
Energy-19.7
Binding len49
Me-5.036
Phylopstem0.2222344818181818
Phylopflank-0.26002462625
Longest consecutive pairings11
Position of longest consecutive pairings38
Pairings in 3prime end7
Position3UTR
2D Structure