Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACGTGTGATGTATAATATTTAGCCAGGG
.(((((((((((((((((....&))))))....)))))........)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_016529
GeneSymbolATP8A2
Binding site6454,6484
Score0.846
Seed1
Au0.529
Energy-18.1
Binding len30
Me-3.793
Phylopstem0.5907820172413794
Phylopflank1.5489718250000002
Longest consecutive pairings6
Position of longest consecutive pairings24
Pairings in 3prime end4
Position3UTR
2D Structure