Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGCAATGCCGCTTCCCTCTGAGCCTCCCTCTCAAGGGCCACGCAGGCAGCTGCAGC
((((((((((..((((..(((&.)))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016529
GeneSymbolATP8A2
Binding site9122,9183
Score0.846
Seed1
Au0.294
Energy-22.8
Binding len21
Me-10.109
Phylopstem-0.5502491
Phylopflank-0.5237923750000001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure